EXACT REACTION LEAPING



Software: Exact acceleration of Gillespie's Stochastic Simulation Algorithm.

Developed By: Scientific Inference Systems Laboratories, UC Irvine.

Language: C/C++

License: GPL

Welcome to the ER-leap download page. ER-leap is an accelerated SSA equivalent stochastic simulator. The algorithm was discovered primarily by Eric Mjolsness at UCI.

The code is written in C++. It requires the libSBML library before being compiled. It was developed using Mac OS X (v10.4) although other operating systems and environments are expected to work.

Dependencies

Download

Source Code (v0.9, 5/28/08)
Source Code (pre-release v0.7, 12/20/07)

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References

Eric Mjolsness, David Orendorff, Philippe Chatelain, and Petros Koumoutsakos. An Exact Accelerated Stochastic Simulation Algorithm. Journal of Chemical Physics 130, 144110 (2009).